MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1511 · 46 genes shown · anchor epiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA epiA (requalified) — GDP-L-fucose synthase epiA gca (requalified) — GDP-mannose 4%2C6-dehydratase gca manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB Rv1513 (family_assigned) — FkbM family methyltransferase Rv1513 rplD (requalified) — 50S ribosomal protein L4 rplD Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c Rv3725 (requalified) — oxidoreductase Rv3725 Rv0139 (family_assigned) — NAD-dependent epimerase/dehydratase family protein Rv0139 Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c galE2 (family_assigned) — SDR family oxidoreductase galE2 Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv1508A (family_assigned) — hypothetical protein Rv1508A rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA pmmA (requalified) — phosphomannomutase/phosphoglucomutase pmmA pmmB (requalified) — phospho-sugar mutase pmmB rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1 lcp1 (requalified) — phosphotransferase Lcp1 lcp1 Rv2959c (requalified) — rhamnosyl O-methyltransferase Rv2959c Rv2958c (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957 rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC Rv1515c (family_assigned) — methyltransferase domain-containing protein Rv1515c Rv1516c (requalified) — glycosyltransferase Rv1516c Rv1518 (requalified) — glycosyltransferase Rv1518 rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA Rv0140 (family_assigned) — DUF427 domain-containing protein Rv0140 cyp142 (requalified) — steroid C26-monooxygenase Cyp142 cyp142 cyp125 (requalified) — steroid C26-monooxygenase cyp125 choD (requalified) — cholesterol oxidase choD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.