MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1502 · 39 genes shown · anchor pimF · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1502 (family_assigned) — hypothetical protein Rv1502 Rv1505c (requalified) — acetyltransferase Rv1505c Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv1507c (family_assigned) — WbqC family protein Rv1507c Rv1500 (family_assigned) — glycosyltransferase family 2 protein Rv1500 Rv1506c (family_assigned) — hypothetical protein Rv1506c rfbE (family_assigned) — ABC transporter ATP-binding protein rfbE Rv1504c (family_assigned) — Conserved hypothetical protein Rv1504c Rv3242c (family_assigned) — ComF family protein Rv3242c Rv1503c (family_assigned) — Conserved hypothetical protein Rv1503c otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c Rv1499 (requalified) — glycosyltransferase (part1) Rv1499 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 Rv3351c (family_assigned) — hypothetical protein Rv3351c dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpB (family_assigned) — F0F1 ATP synthase subunit A atpB rfbD (family_assigned) — ABC transporter permease rfbD glfT1 (requalified) — galactofuranosyl transferase GlfT glfT1 bpa (requalified) — proteasome activator protein Bpa bpa Rv3779 (family_assigned) — DUF6541 family protein Rv3779 xerC (requalified) — tyrosine recombinase XerC xerC Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c tyrA (requalified) — prephenate dehydrogenase TyrA tyrA apt (requalified) — adenine phosphoribosyltransferase apt hemY (requalified) — protoporphyrinogen oxidase hemY nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA otsB2 (requalified) — trehalose-phosphatase otsB2 treS (requalified) — maltose alpha-D-glucosyltransferase treS treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv2004c (family_assigned) — AAA family ATPase Rv2004c Rv2402 (requalified) — trehalase Rv2402

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.