MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1488 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv1487 (family_assigned) — NfeD family protein Rv1487 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 mpa (requalified) — proteasome ATPase mpa lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1100 (family_assigned) — hypothetical protein Rv1100 pepR (family_assigned) — pitrilysin family protein pepR Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS Rv0870c (family_assigned) — YccF domain-containing protein Rv0870c folE (requalified) — GTP cyclohydrolase I FolE folE folB (requalified) — dihydroneopterin aldolase folB Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 folP1 (requalified) — dihydropteroate synthase folP1 rplS (requalified) — 50S ribosomal protein L19 rplS Rv1489A (family_assigned) — hypothetical protein Rv1489A Rv1490 (family_assigned) — hypothetical protein Rv1490 Rv2585c (family_assigned) — ABC transporter substrate-binding protein Rv2585c nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv1359 (family_assigned) — transcriptional regulator Rv1359 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB mec (requalified) — CysO-cysteine peptidase mec glpK (requalified) — glycerol kinase GlpK glpK bpa (requalified) — proteasome activator protein Bpa bpa gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv2743c (family_assigned) — hypothetical protein Rv2743c rsbW (requalified) — anti-sigma B factor RsbW rsbW lppL (family_assigned) — hypothetical protein lppL Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.