MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1480 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1480 (family_assigned) — DUF58 domain-containing protein Rv1480 Rv1481 (family_assigned) — VWA domain-containing protein Rv1481 moxR1 (family_assigned) — transcriptional regulator MoxR1 moxR1 moxR3 (family_assigned) — MoxR family ATPase moxR3 moxR2 (family_assigned) — MoxR family ATPase moxR2 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA rnhB (requalified) — ribonuclease HII rnhB ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB inhA (requalified) — NADH-dependent enoyl-ACP reductase InhA inhA hemZ (requalified) — ferrochelatase hemZ fabG1 (requalified) — 3-oxoacyl-ACP reductase FabG1 fabG1 Rv0049 (dark) — hypothetical protein Rv0049 Rv1474c (family_assigned) — helix-turn-helix domain-containing protein Rv1474c Rv0958 (family_assigned) — ATP-binding protein Rv0958 Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv3693 (family_assigned) — DUF58 domain-containing protein Rv3693 Rv3691 (family_assigned) — hypothetical protein Rv3691 Rv1453 (family_assigned) — PucR family transcriptional regulator Rv1453 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 pirG (requalified) — exported repetitive protein pirG ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 ftsW (family_assigned) — putative lipid II flippase FtsW ftsW lepB (requalified) — signal peptidase I lepB rplS (requalified) — 50S ribosomal protein L19 rplS dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c coaE (requalified) — dephospho-CoA kinase coaE Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fas (requalified) — fatty acid synthase fas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 fabH (requalified) — beta-ketoacyl-ACP synthase III fabH kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB hemY (requalified) — protoporphyrinogen oxidase hemY hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ hemE (requalified) — uroporphyrinogen decarboxylase hemE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.