MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1473A · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1473A (family_assigned) — transcriptional regulator Rv1473A Rv1473 (family_assigned) — macrolide ABC transporter ATP-binding protein Rv1473 echA12 (requalified) — enoyl-CoA hydratase echA12 Rv2314c (family_assigned) — TldD/PmbA family protein Rv2314c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 Rv3662c (requalified) — oxidoreductase Rv3662c Rv2315c (family_assigned) — TldD/PmbA family protein Rv2315c Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv3118 (family_assigned) — hypothetical protein Rv3118 rpsI (requalified) — 30S ribosomal protein S9 rpsI rplO (requalified) — 50S ribosomal protein L15 rplO rpsP (requalified) — 30S ribosomal protein S16 rpsP rplU (requalified) — 50S ribosomal protein L21 rplU fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv2313c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2313c uspA (family_assigned) — sugar ABC transporter permease uspA uspB (family_assigned) — sugar ABC transporter permease UspB uspB uspC (family_assigned) — sugar ABC transporter substrate-binding protein uspC sigF (requalified) — RNA polymerase sigma factor SigF sigF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 rsfB (family_assigned) — STAS domain-containing protein rsfB usfY (family_assigned) — hypothetical protein usfY Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv2843 (family_assigned) — hypothetical protein Rv2843 nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP Rv0814c (family_assigned) — DUF1416 domain-containing protein Rv0814c Rv3605c (family_assigned) — DUF3180 domain-containing protein Rv3605c dppD (family_assigned) — ABC transporter ATP-binding protein dppD dppC (family_assigned) — dipeptide ABC transporter permease DppC dppC dppB (family_assigned) — ABC transporter permease dppB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.