MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1460 · 40 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
sufR (family_assigned) — suf operon transcriptional regulator SufR sufR sufD (requalified) — Fe-S cluster assembly protein SufD sufD Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC csd (requalified) — cysteine desulfurase csd Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c zur (requalified) — zinc uptake transcriptional repressor Zur zur nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR sigI (requalified) — RNA polymerase sigma factor SigI sigI sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1931c (family_assigned) — transcriptional regulator Rv1931c iscS (family_assigned) — cysteine desulfurase family protein iscS Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 cinA (requalified) — competence/damage-inducible protein A cinA Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c embR (requalified) — response regulator transcription factor EmbR embR Rv1930c (requalified) — glutamine amidotransferase Rv1930c virS (family_assigned) — AraC family transcriptional regulator virS Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.