MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1442 · 46 genes shown · anchor PE_PGRS26 · open gene page → · ← back to 1 hop

Evidence: Min score 0
bisC (requalified) — molybdopterin guanine dinucleotide-containing S/N- bisC birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA bioB (requalified) — biotin synthase BioB bioB qcrC (requalified) — cytochrome c qcrC tuf (requalified) — elongation factor Tu tuf PE_PGRS26 (family_assigned) — PE-PGRS family protein PE_PGRS26 PE_PGRS26 gltB (family_assigned) — glutamate synthase large subunit gltB qcrA (requalified) — hypothetical protein qcrA narH (family_assigned) — nitrate reductase subunit beta narH Rv3273 (requalified) — transmembrane carbonic anhydrase Rv3273 fdhD (requalified) — formate dehydrogenase accessory sulfurtransferase fdhD nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 Rv1722 (requalified) — biotin carboxylase Rv1722 bioD (requalified) — dethiobiotin synthase bioD bioA (requalified) — adenosylmethionine--8-amino-7-oxononanoate transam bioA Rv1590 (family_assigned) — hypothetical protein Rv1590 bioF1 (requalified) — 8-amino-7-oxononanoate synthase bioF1 Rv1591 (dark) — DUF2567 domain-containing protein Rv1591 ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaE (family_assigned) — heme-copper oxidase subunit III ctaE rpsL (requalified) — 30S ribosomal protein S12 rpsL tsf (requalified) — translation elongation factor Ts tsf rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rplO (requalified) — 50S ribosomal protein L15 rplO rpsJ (requalified) — 30S ribosomal protein S10 rpsJ PPE18 (family_assigned) — PPE family protein PPE18 PPE18 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 narG (family_assigned) — nitrate reductase subunit alpha narG narI (family_assigned) — respiratory nitrate reductase subunit gamma narI narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narJ (family_assigned) — nitrate reductase subunit delta narJ narK2 (requalified) — nitrate transporter NarK narK2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.