MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1419 · 46 genes shown · anchor uvrC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1419 (requalified) — lectin Rv1419 uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC rapZ (requalified) — RNase adapter RapZ rapZ whiA (family_assigned) — DNA-binding protein WhiA whiA cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA lprH (family_assigned) — hypothetical protein lprH ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 Rv1417 (family_assigned) — PH domain-containing protein Rv1417 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c groEL2 (requalified) — chaperonin GroEL groEL2 groEL1 (requalified) — chaperonin GroEL groEL1 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA fbiA (requalified) — 2-phospho-L-lactate transferase fbiA xerC (requalified) — tyrosine recombinase XerC xerC Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv1413 (family_assigned) — hypothetical protein Rv1413 Rv1414 (family_assigned) — hypothetical protein Rv1414 ribC (requalified) — riboflavin synthase ribC ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv0111 (family_assigned) — acyltransferase family protein Rv0111 hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM deaD (requalified) — DEAD/DEAH box helicase deaD Rv1254 (requalified) — acyltransferase Rv1254 Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 groES (requalified) — chaperonin GroES groES hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 dnaK (requalified) — molecular chaperone DnaK dnaK pgk (requalified) — phosphoglycerate kinase pgk tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba eno (requalified) — phosphopyruvate hydratase eno

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.