MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1418 · 40 genes shown · anchor ribH · open gene page → · ← back to 1 hop

Evidence: Min score 0
lprH (family_assigned) — hypothetical protein lprH ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1417 (family_assigned) — PH domain-containing protein Rv1417 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 Rv1419 (requalified) — lectin Rv1419 Rv1413 (family_assigned) — hypothetical protein Rv1413 Rv1414 (family_assigned) — hypothetical protein Rv1414 rapZ (requalified) — RNase adapter RapZ rapZ whiA (family_assigned) — DNA-binding protein WhiA whiA cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC lppH (requalified) — lipoprotein LppH lppH lpqA (family_assigned) — sensor domain-containing protein lpqA ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribC (requalified) — riboflavin synthase ribC metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA xerC (requalified) — tyrosine recombinase XerC xerC Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA uvrB (family_assigned) — excinuclease ABC subunit UvrB uvrB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA Rv3577 (requalified) — hypothetical protein Rv3577 arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv2060 (family_assigned) — integral membrane protein Rv2060 Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv3015c (requalified) — methionine synthase Rv3015c ligA (requalified) — NAD-dependent DNA ligase LigA ligA lpqQ (family_assigned) — sensor domain-containing protein lpqQ prsA (requalified) — ribose-phosphate diphosphokinase prsA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.