MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1416 · 46 genes shown · anchor ribA1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC metK (requalified) — S-adenosylmethionine synthetase metK mscL (requalified) — large-conductance mechanosensitive channel protein mscL ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB Rv1417 (family_assigned) — PH domain-containing protein Rv1417 ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF lprH (family_assigned) — hypothetical protein lprH fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rplU (requalified) — 50S ribosomal protein L21 rplU Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv1939 (family_assigned) — flavin reductase family protein Rv1939 ephB (requalified) — epoxide hydrolase EphB ephB folE (requalified) — GTP cyclohydrolase I FolE folE moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 Rv1410c (requalified) — aminoglycoside/tetracycline transporter Rv1410c metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metH (requalified) — methionine synthase metH mmuM (requalified) — homocysteine S-methyltransferase mmuM gmk (requalified) — guanylate kinase gmk guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 rraA (requalified) — ribonuclease E activity regulator RraA rraA Rv1722 (requalified) — biotin carboxylase Rv1722 rpe (requalified) — ribulose-phosphate 3-epimerase rpe carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA pyrC (requalified) — dihydroorotase pyrC carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF Rv1382 (requalified) — transporter Rv1382 mihF (requalified) — integration host factor MihF mihF rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL truB (requalified) — tRNA pseudouridine(55) synthase TruB truB rpsO (requalified) — 30S ribosomal protein S15 rpsO lppU (dark) — hypothetical protein lppU cmk (requalified) — (d)CMP kinase cmk Rv1419 (requalified) — lectin Rv1419 Rv1413 (family_assigned) — hypothetical protein Rv1413 Rv1414 (family_assigned) — hypothetical protein Rv1414 fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.