MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1411c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lprG (requalified) — lipoarabinomannan carrier protein LprG lprG Rv1410c (requalified) — aminoglycoside/tetracycline transporter Rv1410c ribC (requalified) — riboflavin synthase ribC eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv2743c (family_assigned) — hypothetical protein Rv2743c pcaA (requalified) — cyclopropane mycolic acid synthase pcaA Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 Rv2557 (family_assigned) — hypothetical protein Rv2557 rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv2558 (family_assigned) — hypothetical protein Rv2558 Rv3217c (dark) — hypothetical protein Rv3217c ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1417 (family_assigned) — PH domain-containing protein Rv1417 lprF (requalified) — lipoprotein LprF lprF lppX (requalified) — LppX_LprAFG lipoprotein lppX ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv2186c (requalified) — polyketide cyclase / dehydrase and lipid transport Rv2186c Rv2693c (dark) — DUF3159 domain-containing protein Rv2693c Rv3031 (family_assigned) — glycoside hydrolase family 57 protein Rv3031 lpqM (requalified) — neutral zinc metallopeptidase lpqM rsdA (requalified) — anti-sigma D factor RsdA rsdA sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA 35kd_ag (family_assigned) — hypothetical protein 35kd_ag lppL (family_assigned) — hypothetical protein lppL pirG (requalified) — exported repetitive protein pirG chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3707c (requalified) — hypothetical protein Rv3707c Rv0470A (family_assigned) — hypothetical protein Rv0470A Rv0471c (requalified) — 1%2C4-dihydroxy-2-naphthoate prenyltransferase Rv0471c Rv0472c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0472c mmaA4 (requalified) — hydroxymycolate synthase MmaA4 mmaA4 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.