MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1408 · 46 genes shown · anchor fmu · open gene page → · ← back to 1 hop

Evidence: Min score 0
rpe (requalified) — ribulose-phosphate 3-epimerase rpe tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB xylB (requalified) — FGGY-family carbohydrate kinase xylB gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu fmt (requalified) — methionyl-tRNA formyltransferase fmt ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG pgk (requalified) — phosphoglycerate kinase pgk metK (requalified) — S-adenosylmethionine synthetase metK alaS (requalified) — alanine--tRNA ligase alaS gmk (requalified) — guanylate kinase gmk tal (requalified) — transaldolase tal pgi (requalified) — glucose-6-phosphate isomerase pgi zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 fba (requalified) — class II fructose-bisphosphate aldolase fba glpX (requalified) — class II fructose-bisphosphatase glpX devB (requalified) — 6-phosphogluconolactonase devB zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 upp (requalified) — uracil phosphoribosyltransferase upp rbsK (requalified) — ribokinase RbsK rbsK fucA (requalified) — L-fuculose-phosphate aldolase fucA serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD dfrA (requalified) — dihydrofolate reductase dfrA gcvT (requalified) — aminomethyltransferase gcvT metH (requalified) — methionine synthase metH purN (requalified) — phosphoribosylglycinamide formyltransferase purN ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH Rv1722 (requalified) — biotin carboxylase Rv1722 tpi (requalified) — triose-phosphate isomerase tpi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap eno (requalified) — phosphopyruvate hydratase eno gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.