MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1404 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1404 (family_assigned) — MarR family transcriptional regulator Rv1404 Rv1403c (requalified) — class I SAM-dependent methyltransferase Rv1403c Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 Rv2060 (family_assigned) — integral membrane protein Rv2060 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv1405c (requalified) — virulence-associated methyltransferase Rv1405c Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv0560c (requalified) — benzoquinone methyltransferase Rv0560c lysE (requalified) — L-lysine exporter lysE fadD21 (requalified) — fatty-acid--AMP ligase FAAL21/FadD21 fadD21 Rv0575c (requalified) — FAD-binding domain Rv0575c Rv0759c (family_assigned) — hypothetical protein Rv0759c Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 tesB1 (requalified) — acyl-CoA thioesterase II tesB1 pykA (requalified) — pyruvate kinase pykA Rv0210 (family_assigned) — hypothetical protein Rv0210 Rv1616 (family_assigned) — DUF2752 domain-containing protein Rv1616 Rv2577 (family_assigned) — metallophosphoesterase family protein Rv2577 Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv2059 (family_assigned) — hypothetical protein Rv2059 mntH (requalified) — divalent metal cation transporter MntH mntH Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c lppH (requalified) — lipoprotein LppH lppH zur (requalified) — zinc uptake transcriptional repressor Zur zur drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv0193c (family_assigned) — hypothetical protein Rv0193c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0195 (requalified) — response regulator transcription factor Rv0195 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr virS (family_assigned) — AraC family transcriptional regulator virS Rv0603 (family_assigned) — hypothetical protein Rv0603 fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsJ (requalified) — 30S ribosomal protein S10 rpsJ ligA (requalified) — NAD-dependent DNA ligase LigA ligA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.