MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1395 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 Rv1393c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1393c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 virS (family_assigned) — AraC family transcriptional regulator virS Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1931c (family_assigned) — transcriptional regulator Rv1931c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c cyp132 (requalified) — cytochrome P450 Cyp132 cyp132 nlhH (family_assigned) — alpha/beta hydrolase nlhH Rv1401 (family_assigned) — membrane protein Rv1401 Rv3741c (requalified) — oxidoreductase Rv3741c Rv3742c (requalified) — oxidoreductase Rv3742c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 embR (requalified) — response regulator transcription factor EmbR embR Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv1930c (requalified) — glutamine amidotransferase Rv1930c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv1724c (dark) — hypothetical protein Rv1724c Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.