MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1391 · 46 genes shown · anchor rpoZ · open gene page → · ← back to 1 hop

Evidence: Min score 0
dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB Rv3600c (requalified) — type III pantothenate kinase Rv3600c coaA (requalified) — pantothenate kinase coaA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ gmk (requalified) — guanylate kinase gmk panC (requalified) — pantoate--beta-alanine ligase panC cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 Rv0075 (family_assigned) — MalY/PatB family protein Rv0075 Rv2294 (family_assigned) — MalY/PatB family protein Rv2294 metK (requalified) — S-adenosylmethionine synthetase metK mihF (requalified) — integration host factor MihF mihF rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD coaE (requalified) — dephospho-CoA kinase coaE ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF panD (requalified) — aspartate 1-decarboxylase panD Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c glyA1 (requalified) — serine hydroxymethyltransferase glyA1 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigA (requalified) — RNA polymerase sigma factor sigA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA apt (requalified) — adenine phosphoribosyltransferase apt pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 cysE (requalified) — serine O-acetyltransferase cysE metB (requalified) — cystathionine gamma-synthase metB metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ sirA (requalified) — sulfite reductase sirA cysK2 (requalified) — cysteine synthase CysK cysK2 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC cbs (requalified) — cystathionine beta-synthase cbs metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH mscL (requalified) — large-conductance mechanosensitive channel protein mscL metH (requalified) — methionine synthase metH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.