MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1386 · 40 genes shown · anchor PPE20 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE15 (family_assigned) — PE family protein PE15 PE15 PPE20 (family_assigned) — PPE family protein PPE20 PPE20 pyrF (requalified) — orotidine-5'-phosphate decarboxylase pyrF Rv1382 (requalified) — transporter Rv1382 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB pyrC (requalified) — dihydroorotase pyrC mihF (requalified) — integration host factor MihF mihF PPE1 (family_assigned) — PPE family protein PPE1 PPE1 PPE4 (family_assigned) — PPE family protein PPE4 PPE4 PPE37 (family_assigned) — PPE family protein PPE37 PPE37 pyrE (requalified) — orotate phosphoribosyltransferase pyrE argG (requalified) — argininosuccinate synthase argG pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsG (requalified) — 30S ribosomal protein S7 rpsG fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 Rv0100 (requalified) — acyl carrier protein Rv0100 Rv0095c (family_assigned) — hypothetical protein Rv0095c eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv3839 (requalified) — DUF2470 domain-containing protein Rv3839 mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA hisE (requalified) — phosphoribosyl-ATP pyrophosphatase hisE hisG (requalified) — ATP phosphoribosyltransferase hisG Rv2120c (family_assigned) — glycine zipper 2TM domain-containing protein Rv2120c irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.