MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1365c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC mkl (family_assigned) — ABC transporter ATP-binding protein mkl Rv3899c (family_assigned) — hypothetical protein Rv3899c rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv1366 (family_assigned) — GTP pyrophosphokinase family protein Rv1366 Rv0497 (family_assigned) — hypothetical protein Rv0497 Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 sigF (requalified) — RNA polymerase sigma factor SigF sigF usfY (family_assigned) — hypothetical protein usfY moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA thiG (requalified) — thiazole synthase thiG thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC thiE (requalified) — thiamine phosphate synthase thiE yrbE1A (family_assigned) — ABC transporter permease yrbE1A yrbE1B (family_assigned) — ABC transporter permease yrbE1B yrbE3A (family_assigned) — ABC transporter permease yrbE3A Rv0588 (family_assigned) — ABC transporter permease Rv0588 yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE3B (family_assigned) — ABC transporter permease yrbE3B eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv0258c (requalified) — hypothetical protein Rv0258c Rv0498 (requalified) — sugar phosphate isomerase/epimerase Rv0498 Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c galK (requalified) — galactokinase galK Rv1751 (requalified) — oxidoreductase Rv1751 Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv2078 (family_assigned) — DUF2563 family protein Rv2078 lppJ (family_assigned) — hypothetical protein lppJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.