MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1364c · 45 genes shown · anchor rsfA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 oprA (requalified) — osmosensory protein OprA oprA rsbW (requalified) — anti-sigma B factor RsbW rsbW bfrA (requalified) — bacterioferritin BfrA bfrA sigF (requalified) — RNA polymerase sigma factor SigF sigF Rv0990c (family_assigned) — SAF domain-containing protein Rv0990c Rv3657c (family_assigned) — membrane protein Rv3657c moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA thiG (requalified) — thiazole synthase thiG thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC thiE (requalified) — thiamine phosphate synthase thiE mkl (family_assigned) — ABC transporter ATP-binding protein mkl Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv0258c (requalified) — hypothetical protein Rv0258c Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0263c (family_assigned) — 5-oxoprolinase/urea amidolyase family protein Rv0263c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c usfY (family_assigned) — hypothetical protein usfY mmcO (requalified) — multicopper oxidase MmcO mmcO bfrB (requalified) — ferritin BfrB bfrB hemZ (requalified) — ferrochelatase hemZ Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c ssd (requalified) — septum site-determining protein Ssd ssd Rv3655c (requalified) — apoptosis inhibitor Rv3655c Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3656c (dark) — DUF4244 domain-containing protein Rv3656c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.