MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1354c · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c moeY (family_assigned) — Rv1355c family protein moeY Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv1356c (requalified) — hypothetical protein Rv1356c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv1357c (requalified) — cyclic diguanylate phosphodiesterase Rv1357c leuS (requalified) — leucine--tRNA ligase leuS rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv0895 (requalified) — diacyglycerol O-acyltransferase Rv0895 fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv0894 (family_assigned) — hypothetical protein Rv0894 metS (requalified) — methionine--tRNA ligase metS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT ileS (requalified) — isoleucine--tRNA ligase ileS gltS (requalified) — glutamate--tRNA ligase gltS argS (requalified) — arginine--tRNA ligase argS sigF (requalified) — RNA polymerase sigma factor SigF sigF usfY (family_assigned) — hypothetical protein usfY lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA thiG (requalified) — thiazole synthase thiG thiC (requalified) — phosphomethylpyrimidine synthase ThiC thiC thiE (requalified) — thiamine phosphate synthase thiE Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 mkl (family_assigned) — ABC transporter ATP-binding protein mkl Rv3899c (family_assigned) — hypothetical protein Rv3899c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.