MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1352 · 46 genes shown · anchor fabG2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1352 (family_assigned) — hypothetical protein Rv1352 Rv1351 (dark) — hypothetical protein Rv1351 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 Rv1810 (family_assigned) — hypothetical protein Rv1810 lppO (requalified) — lipoprotein LpqH lppO PPE26 (family_assigned) — PPE family protein PPE26 PPE26 Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv3705c (family_assigned) — sensor domain-containing protein Rv3705c rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB mce3C (family_assigned) — virulence factor Mce family protein mce3C lprM (family_assigned) — Mce family lipoprotein LprM lprM PPE32 (family_assigned) — PPE family protein PPE32 PPE32 nadA (requalified) — quinolinate synthetase A nadA irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA lppN (family_assigned) — hypothetical protein lppN fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD Rv3538 (requalified) — dehydrogenase Rv3538 htdY (requalified) — 3-hydroxyacyl-thioester dehydratase HtdY htdY Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c mgtC (family_assigned) — MgtC/SapB family protein mgtC PPE33 (family_assigned) — PPE family protein PPE33 PPE33 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 sseB (requalified) — sulfurtransferase sseB Rv2288 (dark) — hypothetical protein Rv2288 cdh (requalified) — CDP-diacylglycerol diphosphatase cdh yjcE (requalified) — Na(+)/H(+) transporter yjcE Rv3669 (family_assigned) — phage holin family protein Rv3669 PE18 (family_assigned) — PE family protein PE18 PE18 PPE25 (family_assigned) — PPE family protein PPE25 PPE25 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 napA (requalified) — DUF3263 domain-containing protein napA Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 sodC (family_assigned) — superoxide dismutase family protein sodC Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 Rv2732c (family_assigned) — hypothetical protein Rv2732c lppL (family_assigned) — hypothetical protein lppL gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA egtC (requalified) — ergothioneine biosynthesis protein EgtC egtC egtD (requalified) — L-histidine N(alpha)-methyltransferase egtD egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE etgB (requalified) — ergothioneine biosynthesis protein EgtB etgB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.