MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1342c · 46 genes shown · anchor lprD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1342c (family_assigned) — hypothetical protein Rv1342c lprD (family_assigned) — hypothetical protein lprD mbtM (requalified) — long-chain-fatty acid--ACP ligase MbtM mbtM Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c mbtN (requalified) — acyl-ACP dehydrogenase MbtN mbtN mbtL (requalified) — acyl carrier protein MbtL mbtL Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c ctaB (requalified) — heme o synthase ctaB qcrA (requalified) — hypothetical protein qcrA Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv3207c (family_assigned) — hypothetical protein Rv3207c Rv0102 (requalified) — cytochrome c oxidase assembly protein Rv0102 Rv2219A (family_assigned) — membrane protein Rv2219A Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0049 (dark) — hypothetical protein Rv0049 Rv0358 (requalified) — peptidase M50 Rv0358 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 mbtE (requalified) — peptide synthetase mbtE mbtB (requalified) — phenyloxazoline synthase MbtB mbtB mbtF (requalified) — peptide synthetase mbtF rplF (requalified) — 50S ribosomal protein L6 rplF ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB fadB (requalified) — fatty oxidation protein FadB fadB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 fas (requalified) — fatty acid synthase fas acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c cobC (requalified) — aminotransferase cobC Rv2235 (family_assigned) — SURF1 family protein Rv2235 ptpA (requalified) — protein-tyrosine-phosphatase ptpA ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA Rv1456c (requalified) — heme A synthase Rv1456c hemZ (requalified) — ferrochelatase hemZ mca (requalified) — mycothiol conjugate amidase Mca mca Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv0361 (family_assigned) — hypothetical protein Rv0361

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.