MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1324 · 46 genes shown · anchor fadA4 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1324 (requalified) — co-chaperone YbbN Rv1324 trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c hemD (requalified) — uroporphyrin-III C-methyltransferase hemD fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap Rv1322A (family_assigned) — hypothetical protein Rv1322A htpG (requalified) — molecular chaperone HtpG htpG groEL2 (requalified) — chaperonin GroEL groEL2 groEL1 (requalified) — chaperonin GroEL groEL1 arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA trxC (requalified) — thioredoxin trxC trxB1 (requalified) — thioredoxin trxB1 csd (requalified) — cysteine desulfurase csd ahpC (requalified) — peroxiredoxin AhpC ahpC trxA (family_assigned) — thioredoxin family protein trxA glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pirG (requalified) — exported repetitive protein pirG hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG hemA (requalified) — glutamyl-tRNA reductase hemA cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ Rv0514 (dark) — hypothetical protein Rv0514 fadB (requalified) — fatty oxidation protein FadB fadB fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs leuA (requalified) — 2-isopropylmalate synthase leuA pgk (requalified) — phosphoglycerate kinase pgk tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba eno (requalified) — phosphopyruvate hydratase eno pgi (requalified) — glucose-6-phosphate isomerase pgi tkt (requalified) — transketolase tkt mutB (requalified) — methylmalonyl-CoA mutase mutB mutA (family_assigned) — methylmalonyl-CoA mutase small subunit mutA accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accD6 (family_assigned) — acyl-CoA carboxylase subunit beta accD6 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.