MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1322 · 46 genes shown · anchor nucS · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv1321 (requalified) — endonuclease NucS Rv1321 Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv1319c (requalified) — adenylate cyclase Rv1319c Rv3909 (dark) — hypothetical protein Rv3909 ogt (requalified) — methylated-DNA--protein-cysteine methyltransferase ogt rshA (requalified) — anti-sigma factor RshA rshA rslA (requalified) — anti-sigma-L factor RslA rslA rseA (requalified) — anti-sigma E factor RseA rseA Rv3258c (dark) — hypothetical protein Rv3258c rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ ndkA (requalified) — nucleoside-diphosphate kinase ndkA pykA (requalified) — pyruvate kinase pykA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA relA (family_assigned) — RelA/SpoT family protein relA moaA2 (requalified) — GTP 3'%2C8-cyclase MoaA moaA2 moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv3835 (family_assigned) — septum formation family protein Rv3835 tagA (requalified) — DNA-3-methyladenine glycosylase I tagA sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH Rv3222c (family_assigned) — hypothetical protein Rv3222c TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv3224B (family_assigned) — Conserved hypothetical protein Rv3224B moeB1 (requalified) — adenylyltransferase/sulfurtransferase MoeZ moeB1 sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv0737 (family_assigned) — MarR family transcriptional regulator Rv0737 Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c pks10 (requalified) — type III polyketide synthase pks10 Rv1146 (requalified) — transmembrane transport protein Rv1146

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.