MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1317c · 46 genes shown · anchor ogt · open gene page → · ← back to 1 hop

Evidence: Min score 0
alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA ogt (requalified) — methylated-DNA--protein-cysteine methyltransferase ogt Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv1321 (requalified) — endonuclease NucS Rv1321 Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c coaE (requalified) — dephospho-CoA kinase coaE Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv1319c (requalified) — adenylate cyclase Rv1319c recA (requalified) — intein-containing recombinase RecA recA dinX (requalified) — DNA polymerase IV dinX tagA (requalified) — DNA-3-methyladenine glycosylase I tagA ndkA (requalified) — nucleoside-diphosphate kinase ndkA pykA (requalified) — pyruvate kinase pykA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA relA (family_assigned) — RelA/SpoT family protein relA moaA2 (requalified) — GTP 3'%2C8-cyclase MoaA moaA2 moaA1 (requalified) — cyclic pyranopterin monophosphate synthase moaA1 def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mutY (requalified) — A/G-specific adenine glycosylase mutY lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN end (requalified) — deoxyribonuclease IV end whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv3909 (dark) — hypothetical protein Rv3909 Rv3395c (family_assigned) — hypothetical protein Rv3395c dnaE2 (requalified) — error-prone DNA polymerase dnaE2 polA (requalified) — DNA polymerase I polA kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB acpS (requalified) — holo-ACP synthase acpS rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1870c (family_assigned) — hypothetical protein Rv1870c rnhB (requalified) — ribonuclease HII rnhB Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 mshD (requalified) — mycothiol synthase mshD prpD (requalified) — 2-methylcitrate dehydratase prpD ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.