MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1315 · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
murA (requalified) — UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU murB (requalified) — UDP-N-acetylmuramate dehydrogenase murB Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD prsA (requalified) — ribose-phosphate diphosphokinase prsA mrsA (requalified) — phosphoglucosamine mutase mrsA pta (requalified) — phosphate acetyltransferase pta glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS lprQ (requalified) — L%2CD-transpeptidase LdtMt5 lprQ Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c cobQ1 (requalified) — cobyric acid synthase cobQ1 cobU (requalified) — bifunctional adenosylcobinamide kinase/adenosylcob cobU cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS cobD (requalified) — cobalamin biosynthesis protein cobD cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB cobN (family_assigned) — cobaltochelatase subunit CobN cobN ftsQ (requalified) — cell division protein FtsQ ftsQ Rv3717 (family_assigned) — hypothetical protein Rv3717 trxC (requalified) — thioredoxin trxC Rv0948c (requalified) — chorismate mutase Rv0948c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 Rv2164c (family_assigned) — hypothetical protein Rv2164c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.