MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1300 · 29 genes shown · anchor prfA · open gene page → · ← back to 1 hop

Evidence: Min score 0
hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK prfA (requalified) — peptide chain release factor 1 prfA Rv1301 (requalified) — L-threonylcarbamoyladenylate synthase Rv1301 atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv2629 (family_assigned) — hypothetical protein Rv2629 atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rpmE (requalified) — 50S ribosomal protein L31 rpmE rfe (requalified) — UDP-N-acetylglucosamine--decaprenyl-phosphate N-ac rfe atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD rplM (requalified) — 50S ribosomal protein L13 rplM rplT (requalified) — 50S ribosomal protein L20 rplT rpmA (requalified) — 50S ribosomal protein L27 rpmA rpsG (requalified) — 30S ribosomal protein S7 rpsG rho (requalified) — transcription termination factor Rho rho atpF (family_assigned) — F0F1 ATP synthase subunit B atpF Rv2630 (requalified) — archease Rv2630 rpsC (requalified) — 30S ribosomal protein S3 rpsC rplW (requalified) — 50S ribosomal protein L23 rplW Rv2631 (requalified) — RNA-splicing ligase RtcB Rv2631 Rv2005c (requalified) — universal stress protein Rv2005c rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 wbbL1 (requalified) — N-acetylglucosaminyl-diphospho-decaprenol L-rhamno wbbL1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.