MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1297 · 46 genes shown · anchor rpmE · open gene page → · ← back to 1 hop

Evidence: Min score 0
rho (requalified) — transcription termination factor Rho rho rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpmE (requalified) — 50S ribosomal protein L31 rpmE gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI yidC (requalified) — membrane protein insertase YidC yidC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC nusA (requalified) — transcription termination factor NusA nusA nusG (requalified) — transcription termination/antitermination protein nusG rpsA (requalified) — 30S ribosomal protein S1 rpsA prfA (requalified) — peptide chain release factor 1 prfA rnpA (requalified) — ribonuclease P protein component rnpA yidD (requalified) — membrane protein insertion efficiency factor YidD yidD sigA (requalified) — RNA polymerase sigma factor sigA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsG (requalified) — 30S ribosomal protein S7 rpsG rplW (requalified) — 50S ribosomal protein L23 rplW rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rhlE (requalified) — DEAD/DEAH box helicase rhlE rplD (requalified) — 50S ribosomal protein L4 rplD pepR (family_assigned) — pitrilysin family protein pepR rplC (requalified) — 50S ribosomal protein L3 rplC rplT (requalified) — 50S ribosomal protein L20 rplT secY (family_assigned) — preprotein translocase subunit SecY secY Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rimP (requalified) — ribosome maturation factor RimP rimP rplK (requalified) — 50S ribosomal protein L11 rplK rplA (requalified) — 50S ribosomal protein L1 rplA rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsL (requalified) — 30S ribosomal protein S12 rpsL hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK rplM (requalified) — 50S ribosomal protein L13 rplM rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmH (requalified) — 50S ribosomal protein L34 rpmH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.