MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1288 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1288 (requalified) — esterase Rv1288 Rv1287 (family_assigned) — RrF2 family transcriptional regulator Rv1287 Rv1289 (family_assigned) — hypothetical protein Rv1289 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 lppF (requalified) — haloacid dehalogenase-like hydrolase lppF Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA glnX (requalified) — protein kinase G-activating protein GlnX glnX adhB (requalified) — alcohol dehydrogenase B adhB cysC (requalified) — adenylyl-sulfate kinase cysC iscS (family_assigned) — cysteine desulfurase family protein iscS Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 espB (requalified) — type VII secretion system ESX-1 target EspB espB Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c Rv1443c (family_assigned) — hypothetical protein Rv1443c espI (family_assigned) — MinD/ParA family protein espI esxA (requalified) — ESAT-6 protein EsxA esxA eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 fadD10 (requalified) — fatty-acid--CoA ligase FadD10 fadD10 fcoT (requalified) — fatty acyl CoA thioesterase FcoT fcoT nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp Rv0100 (requalified) — acyl carrier protein Rv0100 PPE1 (family_assigned) — PPE family protein PPE1 PPE1 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF Rv2319c (requalified) — universal stress protein Rv2319c Rv3668c (requalified) — protease Rv3668c spmT (requalified) — sphingomyelinase spmT Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv0431 (requalified) — tuberculin-like peptide Rv0431 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv3707c (requalified) — hypothetical protein Rv3707c cysT (family_assigned) — sulfate ABC transporter permease subunit CysT cysT subI (family_assigned) — sulfate ABC transporter substrate-binding protein subI cysW (family_assigned) — sulfate ABC transporter permease subunit CysW cysW cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.