MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1278 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279 polA (requalified) — DNA polymerase I polA topA (requalified) — type I DNA topoisomerase topA recA (requalified) — intein-containing recombinase RecA recA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 mpa (requalified) — proteasome ATPase mpa Rv1276c (family_assigned) — hypothetical protein Rv1276c Rv2529 (family_assigned) — hypothetical protein Rv2529 cut2 (family_assigned) — cutinase family protein cut2 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 mec (requalified) — CysO-cysteine peptidase mec dinG (requalified) — ATP-dependent helicase DinG dinG plcB (requalified) — membrane-associated phospholipase B plcB plcC (requalified) — phospholipase C plcC plcA (requalified) — membrane-associated phospholipase A plcA psd (requalified) — phosphatidylserine decarboxylase psd dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recX (requalified) — recombination regulator RecX recX lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA ligC (requalified) — ATP-dependent DNA ligase ligC prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB glpK (requalified) — glycerol kinase GlpK glpK bpa (requalified) — proteasome activator protein Bpa bpa gltB (family_assigned) — glutamate synthase large subunit gltB ppk2 (requalified) — polyphosphate kinase ppk2 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c lprE (family_assigned) — LppP/LprE family lipoprotein lprE rplA (requalified) — 50S ribosomal protein L1 rplA ptbB (requalified) — tyrosine-protein phosphatase PtbB ptbB eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsS (requalified) — 30S ribosomal protein S19 rpsS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.