MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1277 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1278 (family_assigned) — AAA family ATPase Rv1278 polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dinG (requalified) — ATP-dependent helicase DinG dinG Rv1279 (family_assigned) — GMC family oxidoreductase N-terminal domain-contai Rv1279 recA (requalified) — intein-containing recombinase RecA recA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB topA (requalified) — type I DNA topoisomerase topA Rv1276c (family_assigned) — hypothetical protein Rv1276c Rv2529 (family_assigned) — hypothetical protein Rv2529 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK ligC (requalified) — ATP-dependent DNA ligase ligC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB mec (requalified) — CysO-cysteine peptidase mec plcB (requalified) — membrane-associated phospholipase B plcB plcC (requalified) — phospholipase C plcC plcA (requalified) — membrane-associated phospholipase A plcA psd (requalified) — phosphatidylserine decarboxylase psd recX (requalified) — recombination regulator RecX recX lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrA (requalified) — hypothetical protein qcrA ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC gltB (family_assigned) — glutamate synthase large subunit gltB ppk2 (requalified) — polyphosphate kinase ppk2 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c lprE (family_assigned) — LppP/LprE family lipoprotein lprE rplA (requalified) — 50S ribosomal protein L1 rplA fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.