MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1271c · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1271c (family_assigned) — DUF732 domain-containing protein Rv1271c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c lprA (requalified) — TLR2 agonist LprA lprA Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv2253 (family_assigned) — hypothetical protein Rv2253 Rv0203 (requalified) — hemophore Rv0203 pstS1 (family_assigned) — phosphate ABC transporter substrate-binding lipopr pstS1 lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv0435c (family_assigned) — AAA family ATPase Rv0435c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 Rv0493c (family_assigned) — hypothetical protein Rv0493c Rv1269c (family_assigned) — DUF4189 domain-containing protein Rv1269c papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2365c (requalified) — cytidine deaminase Rv2365c Rv3909 (dark) — hypothetical protein Rv3909 ptrp (family_assigned) — hypothetical protein ptrp tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA lpqO (family_assigned) — DUF1259 domain-containing protein lpqO cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c virS (family_assigned) — AraC family transcriptional regulator virS cobB (requalified) — NAD-dependent protein deacylase cobB Rv2252 (requalified) — diacylglycerol kinase Rv2252 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 Rv2251 (requalified) — flavoprotein Rv2251 Rv2250A (family_assigned) — Possible flavoprotein Rv2250A Rv2250c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2250c Rv0063 (requalified) — FAD-binding oxidoreductase Rv0063 Rv0201c (family_assigned) — XRE family transcriptional regulator Rv0201c mmpL11 (requalified) — RND transporter MmpL11 mmpL11 mmpL3 (requalified) — trehalose monomycolate RND transporter MmpL3 mmpL3 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 Rv1157c (dark) — hypothetical protein Rv1157c mmpS4 (requalified) — siderophore RND transporter accessory protein MmpS mmpS4 pstC1 (family_assigned) — phosphate ABC transporter permease PstC pstC1 pstA2 (family_assigned) — phosphate ABC transporter permease PstA pstA2 pstB (family_assigned) — phosphate ABC transporter ATP-binding protein pstB pstC2 (family_assigned) — phosphate ABC transporter permease subunit PstC pstC2 pstA1 (family_assigned) — phosphate ABC transporter permease PstA pstA1 phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.