MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1270c · 46 genes shown · anchor papA5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
lprA (requalified) — TLR2 agonist LprA lprA Rv0493c (family_assigned) — hypothetical protein Rv0493c Rv1269c (family_assigned) — DUF4189 domain-containing protein Rv1269c papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv2365c (requalified) — cytidine deaminase Rv2365c Rv3909 (dark) — hypothetical protein Rv3909 ptrp (family_assigned) — hypothetical protein ptrp PPE42 (family_assigned) — PPE family protein PPE42 PPE42 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 Rv0492c (family_assigned) — GMC family oxidoreductase Rv0492c Rv0492A (family_assigned) — hypothetical protein Rv0492A Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv1648 (family_assigned) — rhomboid-like protein Rv1648 Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv1268c (family_assigned) — C39 family peptidase Rv1268c Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 sseA (requalified) — sulfurtransferase sseA Rv3005c (family_assigned) — DoxX family protein Rv3005c drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB drrC (family_assigned) — ABC transporter permease drrC ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC Rv2366c (family_assigned) — hemolysin family protein Rv2366c era (requalified) — GTPase Era era Rv2367c (requalified) — endoribonuclease Rv2367c phoH1 (requalified) — phosphate starvation-inducible protein PhoH phoH1 Rv2370c (family_assigned) — PucR family transcriptional regulator Rv2370c mec (requalified) — CysO-cysteine peptidase mec murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv2209 (requalified) — MFS transporter Rv2209

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.