MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1260 · 46 genes shown · anchor udgB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1260 (family_assigned) — FAD-binding protein Rv1260 udgB (requalified) — uracil DNA glycosylase udgB Rv1258c (requalified) — MFS transporter Rv1258c erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c cyp130 (requalified) — cytochrome P450 Cyp130 cyp130 Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi pks1 (requalified) — polyketide synthase pks1 pks12 (requalified) — type I polyketide synthase pks12 Rv1255c (family_assigned) — helix-turn-helix domain-containing protein Rv1255c Rv3377c (requalified) — type B diterpene cyclase Rv3377c Rv3073c (dark) — DUF488 domain-containing protein Rv3073c tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 eis (requalified) — enhanced intracellular survival protein eis iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR ptrp (family_assigned) — hypothetical protein ptrp phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv1815 (family_assigned) — hypothetical protein Rv1815 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv2280 (family_assigned) — Probable dehydrogenase Rv2280 glcB (requalified) — malate synthase G glcB icl1 (requalified) — isocitrate lyase icl1 aceAb (requalified) — isocitrate lyase AceAb aceAb aceAa (requalified) — isocitrate lyase AceAa aceAa pks13 (requalified) — polyketide synthase Pks13 pks13 Rv2776c (requalified) — oxidoreductase Rv2776c mbtE (requalified) — peptide synthetase mbtE glnA3 (family_assigned) — glutamine synthetase family protein glnA3 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 bfrA (requalified) — bacterioferritin BfrA bfrA glnA4 (family_assigned) — glutamine synthetase family protein glnA4 Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv2800 (family_assigned) — CocE/NonD family hydrolase Rv2800 PE14 (family_assigned) — PE family protein PE14 PE14 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.