MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1254 · 46 genes shown · anchor deaD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1254 (requalified) — acyltransferase Rv1254 deaD (requalified) — DEAD/DEAH box helicase deaD Rv3635 (family_assigned) — hypothetical protein Rv3635 Rv0227c (family_assigned) — membrane protein Rv0227c Rv3906c (requalified) — pullulanase Rv3906c Rv3035 (family_assigned) — hypothetical protein Rv3035 lprE (family_assigned) — LppP/LprE family lipoprotein lprE Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c Rv0756c (family_assigned) — hypothetical protein Rv0756c pirG (requalified) — exported repetitive protein pirG esxT (family_assigned) — WXG100 family type VII secretion target esxT Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv0111 (family_assigned) — acyltransferase family protein Rv0111 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 galE1 (requalified) — UDP-glucose 4-epimerase galE1 mmpA (requalified) — hypothetical protein mmpA Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv3668c (requalified) — protease Rv3668c lprC (family_assigned) — DUF3558 domain-containing protein lprC Rv0228 (requalified) — acyltransferase Rv0228 pcnA (requalified) — poly(A) polymerase PcnA pcnA murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ Rv3909 (dark) — hypothetical protein Rv3909 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3802c (requalified) — phospholipase Rv3802c aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2529 (family_assigned) — hypothetical protein Rv2529 polA (requalified) — DNA polymerase I polA Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 phoP (requalified) — two-component system response regulator PhoP phoP phoR (requalified) — sensory box histidine kinase PhoR phoR Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.