MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1252c · 46 genes shown · anchor deaD · open gene page → · ← back to 1 hop

Evidence: Min score 0
lprE (family_assigned) — LppP/LprE family lipoprotein lprE dut (requalified) — deoxyuridine 5'-triphosphate nucleotidohydrolase dut Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1251c (family_assigned) — TM0106 family RecB-like putative nuclease Rv1251c polA (requalified) — DNA polymerase I polA deaD (requalified) — DEAD/DEAH box helicase deaD Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c Rv0308 (family_assigned) — phosphatase PAP2 family protein Rv0308 rplF (requalified) — 50S ribosomal protein L6 rplF dinG (requalified) — ATP-dependent helicase DinG dinG rplA (requalified) — 50S ribosomal protein L1 rplA lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN thyA (requalified) — thymidylate synthase ThyA thyA tmk (requalified) — dTMP kinase tmk ndkA (requalified) — nucleoside-diphosphate kinase ndkA thyX (requalified) — FAD-dependent thymidylate synthase thyX dcd (requalified) — dCTP deaminase dcd topA (requalified) — type I DNA topoisomerase topA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 recA (requalified) — intein-containing recombinase RecA recA Rv0111 (family_assigned) — acyltransferase family protein Rv0111 hsdM (requalified) — class I SAM-dependent DNA methyltransferase hsdM Rv1254 (requalified) — acyltransferase Rv1254 Rv2345 (family_assigned) — TPM domain-containing protein Rv2345 Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c rplD (requalified) — 50S ribosomal protein L4 rplD rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 glf (requalified) — UDP-galactopyranose mutase glf Rv0309 (requalified) — L%2CD-transpeptidase Rv0309 Rv0307c (family_assigned) — hypothetical protein Rv0307c cyp140 (requalified) — cytochrome P450 cyp140 cyp136 (requalified) — cytochrome P450 cyp136 rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.