MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1242 · 46 genes shown · anchor vapB33 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 vapB33 (requalified) — type II toxin-antitoxin system antitoxin VapB33 vapB33 mdh (requalified) — malate dehydrogenase mdh vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 corA (requalified) — magnesium/cobalt transporter CorA corA vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 PE_PGRS10 (family_assigned) — PE-PGRS family protein PE_PGRS10 PE_PGRS10 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr rip (requalified) — zinc metalloprotease Rip rip vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv3479 (requalified) — transmembrane protein Rv3479 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapB12 (requalified) — antitoxin vapB12 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 mazE9 (requalified) — antitoxin MazE9 mazE9 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ Rv2323c (family_assigned) — hypothetical protein Rv2323c Rv1234 (requalified) — general stress protein Rv1234 vapB9 (requalified) — antitoxin VapB9 vapB9 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.