MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1239c · 46 genes shown · anchor mdh · open gene page → · ← back to 1 hop

Evidence: Min score 0
corA (requalified) — magnesium/cobalt transporter CorA corA mdh (requalified) — malate dehydrogenase mdh Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ Rv2323c (family_assigned) — hypothetical protein Rv2323c Rv1234 (requalified) — general stress protein Rv1234 vapB33 (requalified) — type II toxin-antitoxin system antitoxin VapB33 vapB33 vapC33 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC33 ftsX (requalified) — permease-like cell division protein FtsX ftsX Rv1232c (requalified) — magnesium transporter Rv1232c Rv1833c (requalified) — haloalkane dehalogenase Rv1833c moeW (family_assigned) — ThiF family adenylyltransferase moeW citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA rsfB (family_assigned) — STAS domain-containing protein rsfB Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 proV (family_assigned) — glycine betaine/L-proline ABC transporter ATP-bind proV proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX proW (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proW proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 rocD2 (family_assigned) — Probable ornithine aminotransferase (C-terminus pa rocD2 rocE (requalified) — amino acid permease rocE Rv2319c (requalified) — universal stress protein Rv2319c Rv2324 (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2324 gmk (requalified) — guanylate kinase gmk lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY sugA (family_assigned) — trehalose ABC transporter permease SugA sugA sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 ftsE (family_assigned) — cell division ATP-binding protein FtsE ftsE smpB (family_assigned) — SsrA-binding protein SmpB smpB Rv3099c (family_assigned) — maleylpyruvate isomerase family mycothiol-dependen Rv3099c prfB (requalified) — peptide chain release factor PrfB prfB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.