MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1231c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1231c (family_assigned) — DUF1003 domain-containing protein Rv1231c Rv1232c (requalified) — magnesium transporter Rv1232c Rv1233c (family_assigned) — DUF4190 domain-containing protein Rv1233c Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c Rv1234 (requalified) — general stress protein Rv1234 mrp (family_assigned) — Mrp/NBP35 family ATP-binding protein mrp sugA (family_assigned) — trehalose ABC transporter permease SugA sugA lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY sugB (family_assigned) — trehalose ABC transporter permease SugB sugB sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC ctpB (requalified) — cation-translocating P-type ATPase ctpB Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3365c (requalified) — sensor histidine kinase Rv3365c Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG ugpC (family_assigned) — ABC transporter ATP-binding protein ugpC ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c uspA (family_assigned) — sugar ABC transporter permease uspA uspB (family_assigned) — sugar ABC transporter permease UspB uspB ugpB (family_assigned) — ABC transporter substrate-binding protein ugpB Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c ugpA (family_assigned) — sugar ABC transporter permease ugpA ctpA (requalified) — heavy metal translocating P-type ATPase ctpA sodC (family_assigned) — superoxide dismutase family protein sodC ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB Rv1885c (requalified) — chorismate mutase Rv1885c ripC (requalified) — peptidoglycan hydrolase RipC ripC sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 rip (requalified) — zinc metalloprotease Rip rip frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA frdB (family_assigned) — succinate dehydrogenase iron-sulfur subunit frdB frdD (family_assigned) — fumarate reductase subunit FrdD frdD Rv1004c (family_assigned) — hypothetical protein Rv1004c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.