MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1228 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqX (dark) — hypothetical protein lpqX Rv1227c (family_assigned) — PH domain-containing protein Rv1227c Rv1226c (family_assigned) — PH domain-containing protein Rv1226c lppR (family_assigned) — sensor domain-containing protein lppR lppL (family_assigned) — hypothetical protein lppL lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK lpqM (requalified) — neutral zinc metallopeptidase lpqM lppH (requalified) — lipoprotein LppH lppH fecB (family_assigned) — iron-siderophore ABC transporter substrate-binding fecB lpqI (requalified) — lipoprotein LpqI lpqI modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB lpqT (requalified) — lipoprotein LpqT lpqT Rv3278c (family_assigned) — PH domain-containing protein Rv3278c Rv1225c (family_assigned) — HAD-IIA family hydrolase Rv1225c moeA2 (requalified) — molybdopterin molybdenumtransferase moeA2 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA Rv3365c (requalified) — sensor histidine kinase Rv3365c eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv1234 (requalified) — general stress protein Rv1234 lepA (requalified) — translation elongation factor 4 lepA Rv2405 (family_assigned) — hypothetical protein Rv2405 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0431 (requalified) — tuberculin-like peptide Rv0431 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 Rv0398c (family_assigned) — hypothetical protein Rv0398c Rv0907 (family_assigned) — hypothetical protein Rv0907 Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv2305 (family_assigned) — hypothetical protein Rv2305 lpqL (family_assigned) — M28 family metallopeptidase lpqL Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv2980 (dark) — DUF3515 domain-containing protein Rv2980 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3577 (requalified) — hypothetical protein Rv3577 arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv2060 (family_assigned) — integral membrane protein Rv2060 Rv2059 (family_assigned) — hypothetical protein Rv2059 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c adhC (requalified) — NAD(P)-dependent alcohol dehydrogenase adhC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.