MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1222 · 46 genes shown · anchor tatB · open gene page → · ← back to 1 hop

Evidence: Min score 0
rseA (requalified) — anti-sigma E factor RseA rseA tatB (requalified) — Sec-independent protein translocase protein TatB tatB sigE (requalified) — RNA polymerase sigma factor SigE sigE htrA (requalified) — serine protease HtrA htrA Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv1083 (dark) — hypothetical protein Rv1083 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA cfp6 (requalified) — low molecular weight protein antigen 6 cfp6 Rv2468c (requalified) — hypothetical protein Rv2468c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv3212 (family_assigned) — hypothetical protein Rv3212 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA tatC (family_assigned) — twin-arginine translocase subunit TatC tatC Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv1220c (requalified) — methyltransferase Rv1220c mpa (requalified) — proteasome ATPase mpa glpK (requalified) — glycerol kinase GlpK glpK mec (requalified) — CysO-cysteine peptidase mec prcB (family_assigned) — proteasome subunit beta prcB xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 bcp (requalified) — thioredoxin-dependent thiol peroxidase bcp Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c mca (requalified) — mycothiol conjugate amidase Mca mca Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv0358 (requalified) — peptidase M50 Rv0358 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0477 (dark) — DUF2599 domain-containing protein Rv0477 Rv0476 (requalified) — transmembrane protein Rv0476 ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2468A (family_assigned) — hypothetical protein Rv2468A qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv1638A (family_assigned) — hypothetical protein Rv1638A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.