MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1219c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c Rv1220c (requalified) — methyltransferase Rv1220c Rv0523c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv0523c PE14 (family_assigned) — PE family protein PE14 PE14 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv3050c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3050c mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 Rv2779c (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2779c Rv1686c (family_assigned) — ABC transporter permease Rv1686c cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 rplC (requalified) — 50S ribosomal protein L3 rplC mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 Rv2800 (family_assigned) — CocE/NonD family hydrolase Rv2800 Rv1703c (requalified) — O-methyltransferase Rv1703c sigE (requalified) — RNA polymerase sigma factor SigE sigE hemL (requalified) — glutamate-1-semialdehyde 2%2C1-aminomutase hemL Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 Rv0756c (family_assigned) — hypothetical protein Rv0756c Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 ccdA (requalified) — cytochrome C-type biogenesis protein CcdA ccdA Rv0526 (requalified) — thioredoxin Rv0526 rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE Rv3049c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3049c nrdH (requalified) — redoxin NrdH nrdH nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 Rv0250c (family_assigned) — hypothetical protein Rv0250c Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 Rv2778c (family_assigned) — SRPBCC family protein Rv2778c vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.