MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1217c · 32 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c Rv1686c (family_assigned) — ABC transporter permease Rv1686c Rv1220c (requalified) — methyltransferase Rv1220c Rv1687c (family_assigned) — ABC transporter ATP-binding protein Rv1687c drrC (family_assigned) — ABC transporter permease drrC drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA PE14 (family_assigned) — PE family protein PE14 PE14 drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 cysA1 (family_assigned) — sulfate ABC transporter ATP-binding protein CysA cysA1 rplC (requalified) — 50S ribosomal protein L3 rplC Rv2800 (family_assigned) — CocE/NonD family hydrolase Rv2800 Rv1685c (family_assigned) — TetR family transcriptional regulator Rv1685c mpg (requalified) — DNA-3-methyladenine glycosylase mpg tyrS (requalified) — tyrosine--tRNA ligase tyrS Rv1703c (requalified) — O-methyltransferase Rv1703c sigE (requalified) — RNA polymerase sigma factor SigE sigE irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL9 (requalified) — RND transporter MmpL9 mmpL9

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.