MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1201c · 46 genes shown · anchor dapE · open gene page → · ← back to 1 hop

Evidence: Min score 0
dapD (requalified) — 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxyla dapD dapB (requalified) — 4-hydroxy-tetrahydrodipicolinate reductase dapB dapC (requalified) — pyridoxal phosphate-dependent aminotransferase dapC argD (requalified) — acetylornithine transaminase argD dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA amiA1 (requalified) — N-acyl-L-amino acid amidohydrolase AmiA amiA1 mdh (requalified) — malate dehydrogenase mdh amiB1 (requalified) — amidase AmiB amiB1 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT serS (requalified) — serine--tRNA ligase serS Rv3661 (family_assigned) — HAD-IB family hydrolase Rv3661 fas (requalified) — fatty acid synthase fas dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA Rv2772c (family_assigned) — hypothetical protein Rv2772c lysA (requalified) — diaminopimelate decarboxylase lysA Rv2771c (family_assigned) — flavodoxin family protein Rv2771c pcnA (requalified) — poly(A) polymerase PcnA pcnA fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadB (requalified) — fatty oxidation protein FadB fadB pheA (requalified) — prephenate dehydratase pheA argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC argB (requalified) — acetylglutamate kinase argB argF (requalified) — ornithine carbamoyltransferase argF argG (requalified) — argininosuccinate synthase argG argR (requalified) — arginine repressor argR dapF (requalified) — diaminopimelate epimerase dapF dapC (requalified) — succinyldiaminopimelate transaminase dapC guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt argS (requalified) — arginine--tRNA ligase argS rplK (requalified) — 50S ribosomal protein L11 rplK pmmB (requalified) — phospho-sugar mutase pmmB deoD (requalified) — purine-nucleoside phosphorylase deoD lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 Rv3304 (requalified) — gamma-glutamylcyclotransferase Rv3304

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.