MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1177 · 46 genes shown · anchor dapC · open gene page → · ← back to 1 hop

Evidence: Min score 0
fdxC (family_assigned) — ferredoxin family protein fdxC dapC (requalified) — succinyldiaminopimelate transaminase dapC desA1 (requalified) — acyl-ACP desaturase DesA desA1 desA2 (requalified) — acyl-ACP desaturase desA2 dusB (requalified) — tRNA dihydrouridine synthase DusB dusB Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 mdh (requalified) — malate dehydrogenase mdh fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c fprB (requalified) — FAD-dependent oxidoreductase fprB hemD (requalified) — uroporphyrin-III C-methyltransferase hemD lysA (requalified) — diaminopimelate decarboxylase lysA dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE dapF (requalified) — diaminopimelate epimerase dapF Rv3230c (requalified) — NADPH oxidoreductase Rv3230c desA3 (requalified) — stearoyl-CoA 9-desaturase desA3 fas (requalified) — fatty acid synthase fas nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI Rv3282 (requalified) — nucleoside triphosphate pyrophosphatase Rv3282 Rv0825c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0825c gltS (requalified) — glutamate--tRNA ligase gltS Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 aroF (requalified) — chorismate synthase aroF pta (requalified) — phosphate acetyltransferase pta sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC acn (requalified) — iron-regulated aconitate hydratase Acn acn icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 purB (requalified) — adenylosuccinate lyase purB citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC fum (requalified) — class II fumarate hydratase fum mez (requalified) — NAD-dependent malic enzyme mez pca (requalified) — pyruvate carboxylase pca gltB (family_assigned) — glutamate synthase large subunit gltB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB narH (family_assigned) — nitrate reductase subunit beta narH sirA (requalified) — sulfite reductase sirA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.