MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1170 · 46 genes shown · anchor mshA · open gene page → · ← back to 1 hop

Evidence: Min score 0
mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv1171 (family_assigned) — hypothetical protein Rv1171 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC mshD (requalified) — mycothiol synthase mshD Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv2134c (dark) — hypothetical protein Rv2134c Rv0360c (family_assigned) — hypothetical protein Rv0360c PPE17 (family_assigned) — PPE family protein PPE17 PPE17 lipX (requalified) — lipase LipX lipX Rv2286c (family_assigned) — DsbA family protein Rv2286c Rv3198A (requalified) — glutaredoxin protein Rv3198A Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA glgB (requalified) — 1%2C4-alpha-glucan branching protein GlgB glgB treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv0485 (family_assigned) — transcriptional regulator Rv0485 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv0822c (family_assigned) — LCP family protein Rv0822c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c mca (requalified) — mycothiol conjugate amidase Mca mca cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ cysE (requalified) — serine O-acetyltransferase cysE Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c helZ (requalified) — DEAD/DEAH box helicase helZ TB22.2 (family_assigned) — RsiV family protein TB22.2 PE23 (family_assigned) — PE family protein PE23 PE23 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 Rv2136c (requalified) — undecaprenyl-diphosphate phosphatase Rv2136c Rv2137c (dark) — hypothetical protein Rv2137c Rv0361 (family_assigned) — hypothetical protein Rv0361 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c PE25 (family_assigned) — PE family protein PE25 PE25 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.