MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1166 · 43 genes shown · anchor typA · open gene page → · ← back to 1 hop

Evidence: Min score 0
lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW typA (requalified) — translational GTPase TypA typA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv3850 (family_assigned) — DUF6474 family protein Rv3850 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2732c (family_assigned) — hypothetical protein Rv2732c narI (family_assigned) — respiratory nitrate reductase subunit gamma narI narJ (family_assigned) — nitrate reductase subunit delta narJ Rv1109c (requalified) — lipid droplet-associated protein Rv1109c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c narH (family_assigned) — nitrate reductase subunit beta narH narG (family_assigned) — nitrate reductase subunit alpha narG rplA (requalified) — 50S ribosomal protein L1 rplA Rv3851 (dark) — hypothetical protein Rv3851 espR (family_assigned) — type VII secretion system ESX-1 transcriptional re espR menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv3437 (dark) — DUF2510 domain-containing protein Rv3437 Rv3205c (family_assigned) — hypothetical protein Rv3205c rhlE (requalified) — DEAD/DEAH box helicase rhlE lppL (family_assigned) — hypothetical protein lppL miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB narX (family_assigned) — respiratory nitrate reductase subunit gamma narX narK2 (requalified) — nitrate transporter NarK narK2 narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv0385 (requalified) — FAD-binding oxidoreductase Rv0385 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 pyrE (requalified) — orotate phosphoribosyltransferase pyrE pyrD (requalified) — quinone-dependent dihydroorotate dehydrogenase pyrD carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB Rv0381c (dark) — hypothetical protein Rv0381c folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC valS (requalified) — valine--tRNA ligase valS Rv0863 (family_assigned) — hypothetical protein Rv0863

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.