MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1158c · 45 genes shown · anchor pimE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1158c (dark) — hypothetical protein Rv1158c Rv1157c (dark) — hypothetical protein Rv1157c gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI pimE (requalified) — mannosyltransferase pimE pirG (requalified) — exported repetitive protein pirG eno (requalified) — phosphopyruvate hydratase eno ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c rapZ (requalified) — RNase adapter RapZ rapZ PPE24 (family_assigned) — PPE family protein PPE24 PPE24 Rv2507 (family_assigned) — MmpS family transport accessory protein Rv2507 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ftsW (family_assigned) — putative lipid II flippase FtsW ftsW rhlE (requalified) — DEAD/DEAH box helicase rhlE rplD (requalified) — 50S ribosomal protein L4 rplD pepR (family_assigned) — pitrilysin family protein pepR rplC (requalified) — 50S ribosomal protein L3 rplC rho (requalified) — transcription termination factor Rho rho rplT (requalified) — 50S ribosomal protein L20 rplT Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC pykA (requalified) — pyruvate kinase pykA pgk (requalified) — phosphoglycerate kinase pgk gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap fba (requalified) — class II fructose-bisphosphate aldolase fba ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB Rv1565c (family_assigned) — acyltransferase family protein Rv1565c Rv0039c (dark) — hypothetical protein Rv0039c Rv3668c (requalified) — protease Rv3668c Rv3847 (requalified) — peptidase Rv3847 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC cuvA (requalified) — carbon utilization/virulence protein CuvA cuvA whiA (family_assigned) — DNA-binding protein WhiA whiA uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1417 (family_assigned) — PH domain-containing protein Rv1417 fbiA (requalified) — 2-phospho-L-lactate transferase fbiA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.