MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1157c · 44 genes shown · anchor pimE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1157c (dark) — hypothetical protein Rv1157c Rv1158c (dark) — hypothetical protein Rv1158c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA pirG (requalified) — exported repetitive protein pirG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD pimE (requalified) — mannosyltransferase pimE eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB Rv3091 (family_assigned) — patatin-like phospholipase family protein Rv3091 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI eno (requalified) — phosphopyruvate hydratase eno Rv0312 (family_assigned) — Hsp70 family protein Rv0312 mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsQ (requalified) — cell division protein FtsQ ftsQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD Rv1565c (family_assigned) — acyltransferase family protein Rv1565c Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0051 (family_assigned) — glycosyltransferase family 87 protein Rv0051 aftD (family_assigned) — DUF3367 domain-containing protein aftD mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 espB (requalified) — type VII secretion system ESX-1 target EspB espB adnA (requalified) — ATP-dependent DNA helicase AdnA adnA uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 uvrD1 (requalified) — ATP-dependent DNA helicase UvrD uvrD1 Rv3200c (family_assigned) — potassium channel family protein Rv3200c nudC (requalified) — NAD(+) diphosphatase nudC pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT PE_PGRS42 (family_assigned) — PE-PGRS family protein PE_PGRS42 PE_PGRS42 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.