MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1139c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1139c (family_assigned) — isoprenylcysteine carboxyl methyltransferase famil Rv1139c Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c pks10 (requalified) — type III polyketide synthase pks10 pks11 (requalified) — type III polyketide synthase pks11 Rv1372 (family_assigned) — alpha-pyrone synthesis polyketide synthase-like pr Rv1372 Rv1137c (dark) — Hypothetical protein Rv1137c Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 Rv2161c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv2161c Rv2781c (requalified) — nitronate monooxygenase Rv2781c sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD Rv3224 (requalified) — NAD(P)-dependent oxidoreductase Rv3224 Rv3572 (family_assigned) — hypothetical protein Rv3572 trpD (requalified) — anthranilate phosphoribosyltransferase trpD rslA (requalified) — anti-sigma-L factor RslA rslA fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 ppsA (requalified) — phthiocerol type I polyketide synthase PpsA ppsA Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 narK3 (requalified) — nitrate/nitrite transporter narK3 Rv1373 (requalified) — glycolipid sulfotransferase Rv1373 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c Rv0021c (family_assigned) — nitronate monooxygenase family protein Rv0021c narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU narK2 (requalified) — nitrate transporter NarK narK2 narK1 (requalified) — nitrate/nitrite transporter narK1 narI (family_assigned) — respiratory nitrate reductase subunit gamma narI sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.