MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1122 · 39 genes shown · anchor zwf1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 devB (requalified) — 6-phosphogluconolactonase devB gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB rpe (requalified) — ribulose-phosphate 3-epimerase rpe Rv1119c (family_assigned) — hypothetical protein Rv1119c Rv1120c (family_assigned) — hypothetical protein Rv1120c Rv0004 (requalified) — DNA replication protein DciA Rv0004 recF (requalified) — DNA replication/repair protein RecF recF tal (requalified) — transaldolase tal Rv1118c (requalified) — hypothetical protein Rv1118c pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap opcA (requalified) — glucose-6-phosphate dehydrogenase assembly protein opcA tkt (requalified) — transketolase tkt upp (requalified) — uracil phosphoribosyltransferase upp rbsK (requalified) — ribokinase RbsK rbsK xylB (requalified) — FGGY-family carbohydrate kinase xylB fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 Rv0891c (family_assigned) — hypothetical protein Rv0891c Rv1359 (family_assigned) — transcriptional regulator Rv1359 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2256c (dark) — hypothetical protein Rv2256c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2147c (requalified) — cell division protein SepF Rv2147c fba (requalified) — class II fructose-bisphosphate aldolase fba pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB tpi (requalified) — triose-phosphate isomerase tpi lppW (family_assigned) — hypothetical protein lppW dosT (requalified) — two-component system sensor histidine kinase DosT dosT devS (requalified) — two-component system sensor histidine kinase DevS devS Rv0845 (requalified) — sensor histidine kinase NarS Rv0845

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.